The tools also have a full backup script, but I didn’t try these tools yet myself, so I can only go by what I’m reading in the documentation there.
Else … the tools require root or at least Rooted Debugging (which is root only for ADB), and with this you should be able to access all of the data partition via ADB yourself.
Unfortunately not, sorry.
I never installed TWRP on my Fairphone 3, I just boot it with fastboot when I need it.